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categoryCompare (version 1.16.2)

minCount: minCount

Description

Extracts and sets the minimum number of genes that an annotation must have to be considered in subsequent steps.

Usage

minCount(object)

Arguments

object
This will be either a HyperGResultCC, ccEnrichResult, or ccEnrichCollection object. See Details for more information.

Details

minCount(object) fetches the set minCount for HyperGResultCC and ccEnrichResult objects minCount(object)<- will set the minCount for HyperGResultCC objects, and when applied to ccEnrichResult and ccEnrichCollection sets the minCount for all of the contained objects, so be careful if you want to use different minCounts for different results

See Also

HyperGResultCC ccEnrichResult ccEnrichCollection

Examples

Run this code
data(ccData)
enrichLists
minCount(enrichLists) <- 5
enrichLists

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