checkDuplicates

Check that the trait are compatible with the tree. Throws an error if not.
Assumes that the trait and tree tips are in the same order, using function 
<code>checkTraitTree</code>.

internal

The Cauchy Process can model pulsed continuous trait evolution
on phylogenies. The likelihood is tractable, and is used for parameter
inference and ancestral trait reconstruction.
See Bastide and Didier (2023) <doi:10.1093/sysbio/syad053>.

Paul Bastide

cauphy

Trait Evolution on Phylogenies Using the Cauchy Process

Gilles Didier

checkDuplicates function

<dl><dt>trait</dt>
<dd>(named) vector or matrix of traits being tested.</dd>
<dt>tree</dt>
<dd>phylogenetic tree.</dd></dl>

Arguments

Check For Duplicated Entries — checkDuplicates

<dl>

<dt>trait</dt>
<dd>(named) vector or matrix of traits being tested.</dd>


<dt>tree</dt>
<dd>phylogenetic tree.</dd>

</dl>

checkDuplicates: Check For Duplicated Entries

Description

Usage

Arguments