plotTempoMech

Plots tpdag, tskeleton and tamat objects.

Various tools for inferring causal models from observational data. The package
includes an implementation of the temporal Peter-Clark (TPC) algorithm. Petersen, Osler
and Ekstrøm (2021) <doi:10.1093/aje/kwab087>. It also includes general tools
for evaluating differences in adjacency matrices, which can be used for evaluating
performance of causal discovery procedures.

Bjarke Hautop Kristensen

causalDisco

Tools for Causal Discovery on Observational Data

Anne Helby Petersen

Tobias Ellegaard Larsen

Claus Thorn Ekstrøm

plotTempoMech function

<dl><dt>x</dt>
<dd>The tpdag/tskeleton or tamat to plot.</dd>
<dt>addTimeAxis</dt>
<dd>Logical indicating whether a time axis should be
added to the plot.</dd>
<dt>addPsi</dt>
<dd>Logical indicating whether the sparsity level should be
added to the plot.</dd>
<dt>varLabels</dt>
<dd>A named list of variable labels.</dd>
<dt>periodLabels</dt>
<dd>A character vector with labels for periods.</dd>
<dt>colors</dt>
<dd>A character vector with colors to use for marking periods.
Should have at least as many elements as the numbers of periods.</dd>
<dt>...</dt>
<dd>Additional arguments passed to <code><a href="/link/plot.igraph?package=causalDisco&version=0.9.5" data-mini-rdoc="causalDisco::plot.igraph">plot.igraph</a></code>.</dd></dl>

Arguments

Plot temporal data generating mechanism — plotTempoMech

<dl>

<dt>x</dt>
<dd>The tpdag/tskeleton or tamat to plot.</dd>


<dt>addTimeAxis</dt>
<dd>Logical indicating whether a time axis should be
added to the plot.</dd>


<dt>addPsi</dt>
<dd>Logical indicating whether the sparsity level should be
added to the plot.</dd>


<dt>varLabels</dt>
<dd>A named list of variable labels.</dd>


<dt>periodLabels</dt>
<dd>A character vector with labels for periods.</dd>


<dt>colors</dt>
<dd>A character vector with colors to use for marking periods.
Should have at least as many elements as the numbers of periods.</dd>


<dt>...</dt>
<dd>Additional arguments passed to <code><a href='https://rdrr.io/pkg/igraph/man/plot.igraph.html'>plot.igraph</a></code>.</dd>

</dl>

plotTempoMech: Plot temporal data generating mechanism

Description

Usage

Value

Arguments