celda (version 0.0.0.9000)

calculateLoglikFromVariables: Calculate a log-likelihood for a user-provided cluster assignment and count matrix, per the desired celda model.

Description

Calculate a log-likelihood for a user-provided cluster assignment and count matrix, per the desired celda model.

Usage

calculateLoglikFromVariables(model, counts, ...)

Arguments

model

Model to use for calculating log-likelihood of assignments; one of ("celda_C", "celda_CG", "celda_G")

counts

The counts matrix used to generate the provided cluster assignments

...

extra parameters passed onto calculateLoglikFromVariables

Value

The log-likelihood of the provided cluster assignment for the provided counts matrix.