Calculates the perplexity (a measure of how well celda's cluster assignments fit the data) for every celda model in a celda_list generated by the celda() function. Perplexity of the cluster assignments given the provided count matrix, as well as resamplings of that count matrix, provide a distribution of perplexities and a better sense of the quality of a given K/L choice.
calculatePerplexityWithResampling(celda.list, counts, resample, title = "")A celda_list object as returned from *celda()*
The counts matrix used to generate the provided celda.list
The number of times to resample the counts matrix for evaluating perplexity. Works with method="perplexity."
Title to be appended to the perplexity plot title. Default is "".
A list with a data frame summarizing all of the calculated perplexities, and a ggplot2 object visualizing them.