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celda (version 0.0.0.9000)

simulateCells.celda_C: Simulate cells from the cell clustering generative model

Description

Simulate cells from the cell clustering generative model

Usage

# S3 method for celda_C
simulateCells(model, S = 10, C.Range = c(10, 100),
  N.Range = c(100, 5000), G = 500, K = 5, alpha = 1, beta = 1, ...)

Arguments

model

Dummy parameter for S3 dispatch

S

Total number of samples

C.Range

Vector of length 2 given the range (min,max) of number of cells for each sample to be randomly generated from the uniform distribution

N.Range

Vector of length 2 given the range (min,max) of number of counts for each cell to be randomly generated from the uniform distribution

G

Total number of Genes to be simulated

K

An integer or range of integers indicating the desired number of cell clusters (for celda_C / celda_CG models)

alpha

Non-zero concentration parameter for sample Dirichlet distribution

beta

Non-zero concentration parameter for gene Dirichlet distribution

...

Unused arguments