convertWellCoordinates

either: a character vector with alphanumeric well identifiers
    (e.g. <code>B03</code> or <code>AB32</code>); or an <code>nx2</code> character matrix whose first column
    contains letters and whose second column contains numbers; or an integer
    vector with position identifiers for wells within a plate (e.g. 27).

a vector of length 2 with names <code>nrow</code> and
    <code>ncol</code> giving the number of rows
    and columns in a plate. E.g. 'c(nrow=32, ncol=48)' for 1536-well 
    plates.

pdim

an alternative way of specifying <code>pdim</code>. Supported
    are the values "24" for <code>c(nrow=4, ncol=6)</code>,
    "96" for <code>c(nrow= 8, ncol=12)</code>,
    "384" for <code>c(nrow=16, ncol=24)</code> and 
    "1536" for <code>c(nrow=32, ncol=48)</code>.

type


  For example, "B02"  &lt;-> c("B", "02") &lt;-> 26, 
  "AB32" &lt;-> c("AB", "32") &lt;-> 1328.


This package provides tools for the analysis of high-throughput assays that were performed in microtitre plate formats (including but not limited to 384-well plates). The functionality includes data import and management, normalisation, quality assessment, replicate summarisation and statistical scoring. A webpage that provides a detailed graphical overview over the data and analysis results is produced. In our work, we have applied the package to RNAi screens on fly and human cells, and for screens of yeast libraries. See ?cellHTS2 for a brief introduction.

Joseph Barry

cellHTS2

Analysis of cell-based screens - revised version of cellHTS

convertWellCoordinates function

For example, "B02"  <-> c("B", "02") <-> 26, 
  "AB32" <-> c("AB", "32") <-> 1328.

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convertWellCoordinates: Converts different well identifiers

Description

Usage

Arguments

Value

Examples