cgdsr (version 1.2.3)

cgdsr-test: Simple test suite for CGDS object.

Description

Queries the CGDS API and returns results of the tests.

Usage

## S3 method for class 'CGDS':
test(x, ...)

Arguments

x

A CGDS object.

...

Not used.

Value

• Test results in text format.

Details

A set of simple tests are evaluated. The format of the returned output from the following queries are tested: "getCancerStudies()", "getCaselists()", and "getGeneticProfiles()"

References

cBio Cancer Genomics Portal: http://www.cbioportal.org/public-portal/

See Also

cgdsr,CGDS

Examples

# Create CGDS object
mycgds = CGDS("http://www.cbioportal.org/public-portal/")

# Run tests
test(mycgds)