cgdsr (version 1.3.0)

cgdsr-test: Simple test suite for CGDS object.

Description

Queries the CGDS API and returns results of the tests.

Usage

# S3 method for CGDS
test(x, ...)

Arguments

x

A CGDS object.

...

Not used.

Value

Test results in text format.

Details

A set of simple tests are evaluated. The format of the returned output from the following queries are tested: "getCancerStudies()", "getCaselists()", and "getGeneticProfiles()"

References

cBio Cancer Genomics Portal: http://www.cbioportal.org/

See Also

cgdsr,CGDS

Examples

# NOT RUN {
# Create CGDS object
mycgds = CGDS("http://www.cbioportal.org/")

# Run tests
test(mycgds)
# }