AET05 Table 1 (Default) Adverse Event Rate Adjusted for Patient-Years at Risk - First Occurrence.The AET05 table produces the standard adverse event rate adjusted for patient-years at risk summary
considering first occurrence.
aet05_main(
adam_db,
dataset = "adsaftte",
arm_var = "ACTARM",
lbl_overall = NULL,
...
)aet05_pre(adam_db, dataset = "adsaftte", ...)
aet05_post(tlg, prune_0 = FALSE, ...)
aet05
the main function returns an rtables object.
the preprocessing function returns a list of data.frame.
the postprocessing function returns an rtables object or an ElementaryTable (null report).
An object of class chevron_t of length 1.
(list of data.frames) object containing the ADaM datasets
(string) the name of a table in the adam_db object.
(string) the arm variable used for arm splitting.
(string) label used for overall column, if set to NULL the overall column is omitted
Further arguments passed to tern::control_incidence_rate().
(TableTree, Listing or ggplot) object typically produced by a main function.
(flag) remove 0 count rows
aet05_main(): Main TLG function
aet05_pre(): Preprocessing
aet05_post(): Postprocessing
Total patient-years at risk is the sum over all patients of the time intervals (in years).
Split columns by arm, typically ACTARM.
Split rows by parameter code.
AVAL is patient-years at risk.
N_EVENTS is the number of adverse events observed.
The table allows confidence level to be adjusted, default is 95%.
Keep zero count rows by default.
library(dplyr)
library(dunlin)
proc_data <- log_filter(syn_data, PARAMCD == "AETTE1", "adsaftte")
run(aet05, proc_data)
run(aet05, proc_data, conf_level = 0.90, conf_type = "exact")
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