get.components

<p>Split a fragment in format chr:start-end to a list of corresponding elements</p>

Toolkit for processing and calling interactions in capture Hi-C data. Converts BAM files into counts of reads linking restriction fragments, and identifies pairs of fragments that interact more than expected by chance. Significant interactions are identified by comparing the observed read count to the expected background rate from a count regression model.

Syed Haider

chicane

Capture Hi-C Analysis Engine

Erle Holgersen

Olivia Leavy

Olivia Fletcher

Frank Dudbridge

get.components function

get.components — get.components

get.components: get.components

Description

Usage

Arguments

Value