verify.interaction.data

interaction.data

<p>Verify that interaction.data object is in expected format. Throws an error if object does not fit requirements.</p>

Toolkit for processing and calling interactions in capture Hi-C data. Converts BAM files into counts of reads linking restriction fragments, and identifies pairs of fragments that interact more than expected by chance. Significant interactions are identified by comparing the observed read count to the expected background rate from a count regression model.

Syed Haider

chicane

Capture Hi-C Analysis Engine

Erle Holgersen

Olivia Leavy

Olivia Fletcher

Frank Dudbridge

verify.interaction.data function

verify.interaction.data — verify.interaction.data

verify.interaction.data: verify.interaction.data

Description

Usage

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Value