starInstallation

binDir

A function allowing the download and installation of STAR (Dobin et al. Bioinformatics 2012) in chimera package folder. The function also creates soft links in the user bin folder to allow the call of the above mentioned program.            


utilities

This package facilitates the characterisation of fusion products events. It allows to import fusion data results from the following fusion finders:  chimeraScan, bellerophontes, deFuse, FusionFinder, FusionHunter, mapSplice, tophat-fusion, FusionMap, STAR, Rsubread, fusionCatcher.

Raffaele A Calogero

chimera

A package for secondary analysis of fusion products

starInstallation function

A function allowing the download and installation of STAR (Dobin et al. Bioinformatics 2012) in chimera package folder. The function also creates soft links in the user bin folder to allow the call of the above mentioned program.

starInstallation: A function to download STAR

Description

Usage

Arguments

Examples