chipseq (version 1.22.0)

peakSummary-methods: Summarizing peak sets

Description

Summarizes a set of peaks into a RangedData object with columns of statistics like the peak maxima and integrals (sums).

Usage

peakSummary(x, ...)

Arguments

x

An object containing peaks, usually a RleViewsList.

...

Arguments to pass to methods

Value

A RangedData object of the peaks, with columns named max, maxpos (position of the maximum, centered), and sum.

See Also

view-summarization-methods in the IRanges package for view summarization methods like viewMaxs and viewSums.