configure_openchrom

Configures <a href="https://lablicate.com/platform/openchrom">OpenChrom</a> to use
command-line interface. Requires OpenChrom version prior to 0.5.0.

Reads chromatograms from binary formats into R objects. Currently supports
conversion of 'Agilent ChemStation', 'Agilent MassHunter', 'Shimadzu LabSolutions',
'ThermoRaw', and 'Varian Workstation' files as well as various text-based formats.
In addition to its internal parsers, chromConverter contains bindings to parsers in
external libraries, such as 'Aston' <https://github.com/bovee/aston>,
'Entab' <https://github.com/bovee/entab>, 'rainbow' <https://rainbow-api.readthedocs.io/>,
and 'ThermoRawFileParser' <https://github.com/compomics/ThermoRawFileParser>.

Ethan Bass

chromConverter

Chromatographic File Converter

James Dillon

Evan Shi

configure_openchrom function

<dl><dt>cli</dt>
<dd>Defaults to NULL. If "true", R will rewrite openchrom ini file to enable CLI.
If "false", R will disable CLI. If NULL, R will not modify the ini file.</dd>
<dt>path</dt>
<dd>Path to 'OpenChrom' executable (Optional). The supplied path will
overwrite the current path.</dd></dl>

Arguments

Author

Configures <a href='https://lablicate.com/platform/openchrom'>OpenChrom</a> to use
command-line interface. Requires OpenChrom version prior to 0.5.0.

Configure 'OpenChrom' parser — configure_openchrom

<dl>

<dt>cli</dt>
<dd>Defaults to NULL. If "true", R will rewrite openchrom ini file to enable CLI.
If "false", R will disable CLI. If NULL, R will not modify the ini file.</dd>


<dt>path</dt>
<dd>Path to 'OpenChrom' executable (Optional). The supplied path will
overwrite the current path.</dd>

</dl>

configure_openchrom: Configure 'OpenChrom' parser

Description

Usage

Value

Arguments

Author

See Also