resample_cifti using the original file names
listed in the
original_fnames argument and the target file names
listed in the
resample_cifti_wrapper( original_fnames, resamp_fnames, original_res, resamp_res, surfL_fname = NULL, surfR_fname = NULL, surfL_target_fname = NULL, surfR_target_fname = NULL, read_dir = NULL, write_dir = NULL, wb_path = NULL )
The files to resample. This is a named list where each element's name is a file type label, and each element's value is a file name. Labels must be one of the following: "cortexL", "cortexR", "ROIcortexL", "ROIcortexR", "surfL", or "surfR". If
NULL, then all these file names should be relative to
Where to write the resampled files. This is a named list where each entry's name is a file type label, and each entry's value is a file name indicating where to write the corresponding resampled file. The recognized file type labels are: "cortexL", "cortexR", "ROIcortexL", "ROIcortexR", "validROIcortexL", and "validROIcortexR".
Entry values can be
NULL, in which case a default file name will be used: see
resample_cifti_default_fname. Default file names will also be used for files that need to be resampled/written but without a corresponding entry in
resamp_fnameswill be ignored if they are not needed based on
[ROI_]brainstructures. For example, if
resamp_fnames$cortexRwill be ignored if specified.
write_dirargument can be used to place each resampled file in the same directory.
The original resolution of the CIFTI cortical surface(s).
Target resolution for resampling (number of cortical surface vertices per hemisphere).
(Optional) File path of GIFTI surface geometry file representing the left cortex.
(Optional) File path of GIFTI surface geometry file representing the right cortex.
- surfL_target_fname, surfR_target_fname
(Optional) File path for the resampled GIFTI surface geometry file representing the left/right cortex. If NULL (default),
Directory to append to the path of every file being read, e.g.
NULL(default), do not append any directory to the path.
read_dirmust already exist, or an error will be raised.
Where should the separated files be placed?
NULL(default) will write them to the current working directory.
write_dirmust already exist, or an error will occur.
(Optional) Path to Connectome Workbench folder or executable. If not provided, should be set with
Currently used by read_cifti and resample_cifti.
The return value of the