parc_add_subcortex

Add the subcortex, with each brain structure as a separate parcel, to
a "dlabel" cortical parcellation.

CIFTI files contain brain imaging data in "grayordinates," which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' provides a unified environment for reading, writing,
visualizing and manipulating CIFTI-format data. It supports the "dscalar,"
"dlabel," and "dtseries" intents. Grayordinate data is read in as a "xifti"
object, which is structured for convenient access to the data and metadata,
and includes support for surface geometry files to enable
spatially-dependent functionality such as static or interactive
visualizations and smoothing.

Amanda Mejia

ciftiTools

Tools for Reading, Writing, Viewing and Manipulating CIFTI Files

Damon Pham

John Muschelli

parc_add_subcortex function

<dl><dt>parc</dt>
<dd>A single-column "dlabel" <code>"xifti"</code> object without
subcortical data.</dd>
<dt>parc_sub</dt>
<dd>A single-column <code>"xifti"</code> object with only
subcortical data. Or, <code>"MNI"</code> (default) to read in and use the MNI
subcortex included in <code>ciftiTools</code>. (The Connectome Workbench is
required.)</dd></dl>

Arguments

Add subcortex to cortical parcellation — parc_add_subcortex

<dl>

<dt>parc</dt>
<dd>A single-column "dlabel" <code>"xifti"</code> object without
subcortical data.</dd>


<dt>parc_sub</dt>
<dd>A single-column <code>"xifti"</code> object with only
subcortical data. Or, <code>"MNI"</code> (default) to read in and use the MNI
subcortex included in <code>ciftiTools</code>. (The Connectome Workbench is
required.)</dd>

</dl>

parc_add_subcortex: Add subcortex to cortical parcellation

Description

Usage

Value

Arguments

See Also