Visualize subcortex of a "xifti"
object
view_xifti_volume(
xifti,
structural_img = "MNI",
idx = 1,
plane = c("axial", "sagittal", "coronal"),
num.slices = 9,
interactive = FALSE,
zlim = NULL,
verbose = TRUE,
...
)view_cifti_volume(
xifti,
structural_img = "MNI",
idx = 1,
plane = c("axial", "sagittal", "coronal"),
num.slices = 9,
interactive = FALSE,
zlim = NULL,
verbose = TRUE,
...
)
viewCIfTI_volume(
xifti,
structural_img = "MNI",
idx = 1,
plane = c("axial", "sagittal", "coronal"),
num.slices = 9,
interactive = FALSE,
zlim = NULL,
verbose = TRUE,
...
)
viewcii_volume(
xifti,
structural_img = "MNI",
idx = 1,
plane = c("axial", "sagittal", "coronal"),
num.slices = 9,
interactive = FALSE,
zlim = NULL,
verbose = TRUE,
...
)
Object of class "xifti".
See is.xifti
and make_xifti
.
The structural MRI image on which to overlay the
subcortical values. Can be a file name, "MNI"
(default) to use
the MNI T1-weighted template, or NULL
to use a blank image.
The time/column index of the "xifti"
data to plot. Must
be a single index (length 1).
If interactive=FALSE, the plane to display.
Default: "axial"
. Other options are "sagittal"
and
"coronal"
.
If interactive=FALSE, the number of slices to display.
Default: 9
.
interactive=TRUE will use papayar to allows for interactive visualization.
A length-2 numeric vector giving the minimum and maximum values to
plot. Data values beyond this range will be truncated to the min/max. If
NULL
(default), will use the min and max of the data.
Should occasional updates be printed? Default: TRUE
.
Additional arguments to pass to papayar::papaya
or oro.nifti::overlay