flatten_xifti

xifti

Should vertices for the medial wall be included with the
cortical data? If <code>NULL</code> (default), do not include them. If any other
value, use that value to fill rows corresponding to the medial wall mask.

medial_wall

"alphabetical" (default) to match the Connectome
Workbench command <code>-cifti-export-dense-mapping</code>, or "spatial" which is
already the ordering used in the <code>"xifti"</code>.

subcort_order

Concatenates the data in a <code>"xifti"</code> object row-wise to form a single matrix.

internal

CIFTI files contain brain imaging data in "grayordinates," which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' provides a unified environment for reading, writing,
visualizing and manipulating CIFTI-format data. It supports the "dscalar,"
"dlabel," and "dtseries" intents. Grayordinate data is read in as a "xifti"
object, which is structured for convenient access to the data and metadata,
and includes support for surface geometry files to enable
spatially-dependent functionality such as static or interactive
visualizations and smoothing.

flatten_xifti: Flatten a `"xifti"`

Description

Usage

Arguments

Value

Details