circlizePlus (version 0.9.0)

ccArrow: Draw an arrow

Description

Object ccCellGeom will call the function circlize::circos.arrow while drawing.

Usage

ccArrow(
  x1,
  x2,
  y,
  width,
  arrow.head.length = NULL,
  arrow.head.width = width * 2,
  arrow.position = c("end", "start"),
  tail = c("normal", "point"),
  border = "black",
  col = "#FFCCCC",
  lty = par("lty"),
  ...
)

Value

Object ccCellGeom

Arguments

x1

Start position of the arrow on the x-axis.

x2

End position of the arrow on the x-axis. Note x2 should be larger than x1. The direction of arrows can be controlled by arrow.position argument.

y

Position of the arrow on the y-axis. Note this is the center of the arrow on y-axis.

width

Width of the arrow body.

arrow.head.length

Length of the arrow head. Note the value should be smaller than the length of the arrow itself (which is x2 - x1).

arrow.head.width

Width of the arrow head.

arrow.position

Where is the arrow head on the arrow. If you want to the arrow in the reversed direction, set this value to "start".

tail

The shape of the arrow tail (the opposite side of arrow head).

border

Border color of the arrow.

col

Filled color of the arrow.

lty

Line style of the arrow.

...

Pass to polygon.

Examples

library(circlizePlus)
cc <- ccPlot(sectors = letters[1:4], xlim = c(0, 10))
track <- ccTrack(ylim = c(0, 1))
cell <- ccCell(sector.index = "a") + ccArrow(x1 = 1, x2 = 9, y=0.5, width=0.5)
track <- track + cell
cc + track