ccGenomicCellGeom-class

It is a subclass of ccCellGeom. It only works if the plotted data is genomic data. Objectified representation of the R package circlize's plotting functions and corresponding parameters at the cell level.

A wrapper for 'circlize'. All components are based on classes and objects. Users can use the addition symbol (+) to combine components for a circular visualization with 'ggplot2' style.The package is described in Zhang Z, Cao T, Huang Y and Xia Y (2025) <doi:10.3389/fgene.2025.1535368>.

Tianze Cao

circlizePlus

Using 'ggplot2' Feature to Write Readable R Code for Circular
Visualization

Zheyu Zhang

ccGenomicCellGeom-class function

<dl>
<dt><code>func</code></dt>
<dd>character. The name of the plot function in the R package circlize.</dd></dl>
<dt><code>params</code></dt>
<dd>list. When the function corresponding to the parameter param is called, it represents the argument of this function.</dd>

Slots

S4 class ccGenomicCellGeom — ccGenomicCellGeom-class

<dl>
<dt><code>func</code></dt>
<dd>character. The name of the plot function in the R package circlize.</dd>


<dt><code>params</code></dt>
<dd>list. When the function corresponding to the parameter param is called, it represents the argument of this function.</dd>


</dl>

ccGenomicCellGeom-class: S4 class ccGenomicCellGeom

Description

Arguments

Slots

Examples