circlizePlus (version 0.9.0)

ccTrackLines: Add lines on all sections of a single track.

Description

Object ccTrackGeom will call the function circlize::circos.trackLines while drawing.

Usage

ccTrackLines(
  sectors,
  x,
  y,
  col = par("col"),
  lwd = par("lwd"),
  lty = par("lty"),
  type = "l",
  straight = FALSE,
  area = FALSE,
  area.baseline = NULL,
  border = "black",
  baseline = "bottom",
  pt.col = par("col"),
  cex = par("cex"),
  pch = par("pch"),
  factors = sectors
)

Value

Object ccTrackGeom

Arguments

sectors

A factor or a character vector which represents the categories of data.

x

Data points on x-axis.

y

Data points on y-axis.

col

Line color.

lwd

Line width.

lty

Line style.

type

Line type, similar as type argument in lines, but only in c("l", "o", "h", "s").

straight

Whether draw straight lines between points.

area

Whether to fill the area below the lines. If it is set to TRUE, col controls the filled color in the area and border controls the color of the line.

area.baseline

Deprecated, use baseline instead.

border

Color for border of the area.

baseline

The base line to draw area, pass to circos.lines.

pt.col

If type is "o", points color.

cex

If type is "o", points size.

pch

If type is "o", points type.

factors

The same as sectors. It will be removed in future versions.

Examples

NULL