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cisPath (version 1.12.0)

Visualization and management of the protein-protein interaction networks.

Description

cisPath is an R package that uses web browsers to visualize and manage protein-protein interaction networks.

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Version

Version

1.12.0

License

GPL (>= 3)

Maintainer

Likun Wang

Last Published

February 15th, 2017

Functions in cisPath (1.12.0)

getMappingFile

Generate the identifier mapping file
cisPath

Visualization of the shortest paths of functional interaction between proteins
combinePPI

Combine PPI information from databases
formatPINAPPI

Format PPI files downloaded from the PINA database (MITAB Format)
networkView

Visualization of the interactions between input proteins
formatiRefIndex

Format PPI files downloaded from the iRefIndex database
easyEditor

Easy editor for network graphs
formatSIFfile

Format PPI file downloaded from the PINA2 database (SIF Format)
formatSTRINGPPI

Format PPI file downloaded from the STRING database