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citbcmst (version 1.0.4)

CIT Breast Cancer Molecular SubTypes Prediction

Description

This package implements the approach to assign tumor gene expression dataset to the 6 CIT Breast Cancer Molecular Subtypes described in Guedj et al 2012.

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Version

Install

install.packages('citbcmst')

Monthly Downloads

23

Version

1.0.4

License

GPL (>= 2)

Maintainer

Laetitia Marisa

Last Published

January 10th, 2014

Functions in citbcmst (1.0.4)

citbcmst

Coreset data used to classify data in Guedj et 2011
cit.assignBcmst

cit.assignBcmst
exp.norm.bertheau07

Affymetrix (U133A) Breast Cancer Expression Data from Bertheau et al 2009
cit.distToCentroids

cit.distToCentroids
cit.dist

cit.dist
cit.dfAggregate

cit.dfAggregate
exp.norm.chanrion08

Non Affymetrix Breast Cancer Expression dataset from Chanrion et al 2008
cit.centroids

cit.centroids