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clValid (version 0.6-1)
Validation of Clustering Results
Description
Statistical and biological validation of clustering results.
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Install
install.packages('clValid')
Monthly Downloads
2,640
Version
0.6-1
License
LGPL
Maintainer
Guy Brock
Last Published
November 6th, 2010
Functions in clValid (0.6-1)
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connectivity
Connectivity Measure
clValid-class
Class "clValid"
BSI
Biological Stability Index
mouse
Mouse Mesenchymal Cells
clValid
Validate Cluster Results
BHI
Biological Homogeneity Index
readAnnotationFile
Read in biological annotation files from external file
stability
Stability Measures
getRanksWeights
Extract ranks and weights from clValid object
plot.sota
Plot Function for a SOTA Object
print.sota
Print Function for a SOTA Object
annotationListToMatrix
Change annotation list to matrix
sota
Self-organizing Tree Algorithm (SOTA)
dunn
Dunn Index
clValid-internal
Internal clValid functions