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clValid (version 0.6-4)
Validation of Clustering Results
Description
Statistical and biological validation of clustering results.
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Install
install.packages('clValid')
Monthly Downloads
2,412
Version
0.6-4
License
LGPL-3
Maintainer
Guy Brock
Last Published
October 18th, 2011
Functions in clValid (0.6-4)
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sota
Self-organizing Tree Algorithm (SOTA)
mouse
Mouse Mesenchymal Cells
BHI
Biological Homogeneity Index
stability
Stability Measures
clValid
Validate Cluster Results
annotationListToMatrix
Change annotation list to matrix
getRanksWeights
Extract ranks and weights from clValid object
dunn
Dunn Index
BSI
Biological Stability Index
print.sota
Print Function for a SOTA Object
plot.sota
Plot Function for a SOTA Object
connectivity
Connectivity Measure
clValid-class
Class "clValid"
readAnnotationFile
Read in biological annotation files from external file
clValid-internal
Internal clValid functions