dat_large

A dataset giving the relationship structure of one large family
and phenotypic data on the family members

datasets

A fast and general implementation of the Elston-Stewart algorithm
that can calculate the likelihoods of large and complex pedigrees.
References for the Elston-Stewart algorithm are
Elston & Stewart (1971) <doi:10.1159/000152448>,
Lange & Elston (1975) <doi:10.1159/000152714> and
Cannings et al. (1978) <doi:10.2307/1426718>.

James Dowty

clipp

Calculating Likelihoods by Pedigree Paring

Kevin Wong

dat_large function

A data frame with 10,002 rows (corresponding to persons) and the
following 6 variables:<dl>
<dt><code>indiv</code></dt>
<dd>an individual identifier for each person</dd><dt><code>mother</code></dt>
<dd>the individual identifier of the person's mother</dd><dt><code>father</code></dt>
<dd>the individual identifier of the person's father</dd><dt><code>sex</code></dt>
<dd>the person's sex (1 = male, 2 = female)</dd><dt><code>aff</code></dt>
<dd>the person's disease status (1 = case, 0 = control)</dd><dt><code>age</code></dt>
<dd>the person's last known age in years (for controls) or
age at diagnosis in years (for cases)</dd>
</dl>

Format

Simulated data on one family with approximately 10,000 members — dat_large

A data frame with 10,002 rows (corresponding to persons) and the
following 6 variables:<dl>
<dt><code>indiv</code></dt>
<dd>an individual identifier for each person</dd>

<dt><code>mother</code></dt>
<dd>the individual identifier of the person's mother</dd>

<dt><code>father</code></dt>
<dd>the individual identifier of the person's father</dd>

<dt><code>sex</code></dt>
<dd>the person's sex (1 = male, 2 = female)</dd>

<dt><code>aff</code></dt>
<dd>the person's disease status (1 = case, 0 = control)</dd>

<dt><code>age</code></dt>
<dd>the person's last known age in years (for controls) or
age at diagnosis in years (for cases)</dd>


</dl>

dat_large: Simulated data on one family with approximately 10,000 members

Description

Usage

Arguments

Format