liver_pheno


 A dataframe containing the sample phenotypic information.


Methods for the nalysis of data from clinical proteomic
profiling studies. The focus is on the studies of human
subjects, which are often observational case-control by design
and have technical replicates. A method for sample size
determination for planning these studies is proposed. It
incorporates routines for adjusting for the expected
heterogeneities and imbalances in the data and the
within-sample replicate correlations.

Stephen Nyangoma

clippda

A package for the clinical proteomic profiling data analysis

liver_pheno function

A data frame with 131 observations on the following 3 variables.
  <dl>
    <dt><code>SampleTag</code></dt><dd>a character/numeric vector of sample ID.</dd> <dt><code>tumor</code></dt><dd>a factor, with levels <code>c</code> and <code>n</code>, describing 
	the  class of the samples.</dd> <dt><code>sex</code></dt><dd>a factor, with levels <code>F</code> and <code>M,</code> describing the gender of the persons
from which the sample has been taken.</dd> </dl> 

Format

Ward DG, Cheng Y, N'Kontchou G, Thar TT, Barget N, Wei W, Billingham LJ, Martin A, Beaugrand M, Johnson PJ: 
	Changes in the serum proteome associated with the development of hepatocellular carcinoma in hepatitis C-related 
cirrhosis. Br J Cancer. 2006, 94(2):287-92.

Source

A dataframe containing the sample phenotypic information.

liver_pheno: A dataframe of phenotypic information

Description

Usage

Arguments

Format

Source

References

Examples