cliqueMS (version 0.3.1)

createanClique.xcmsSet: 'createanClique.xcmsSet' produces an object of class 'anClique'.

Description

anClique creates an 'anClique' object from 'xcmsSet' processed m/z data.

Usage

# S3 method for xcmsSet
createanClique(mzData)

Arguments

mzData

A 'xcmsSet' object with processed m/z data.

Details

CAMERA package has to be installed to use this method.

See Also

anClique-class

Examples

# NOT RUN {
library(cliqueMS)
mzfile <- system.file("standards.mzXML", package = "cliqueMS")
msSet <- xcms::xcmsSet(files = mzfile, method = "centWave",
ppm = 15, peakwidth = c(5,20), snthresh = 10)
ex.anClique <- createanClique.xcmsSet(msSet)
summary(ex.anClique)
# }