prepare_stan_data_full

Prepare data for full Stan model with link parameter inference

internal

Fits cumulative link models (CLMs) for ordinal categorical data
using 'CmdStanR'. Supports various link functions including logit, probit,
cloglog, loglog, cauchit, and flexible parametric links such as
Generalized Extreme Value (GEV), Asymmetric Exponential Power (AEP),
and Symmetric Power. Models are pre-compiled using the 'instantiate'
package for fast execution without runtime compilation. Methods are
described in Agresti (2010, ISBN:978-0-470-08289-8),
Wang and Dey (2011) <doi:10.1007/s10651-010-0154-8>, and
Naranjo, Perez, and Martin (2015) <doi:10.1007/s11222-014-9449-1>.

Tomotaka Momozaki

clmstan

Cumulative Link Models with 'CmdStanR'

prepare_stan_data_full function

<dl><dt>formula</dt>
<dd>A formula specifying the model</dd>
<dt>data</dt>
<dd>A data frame containing the variables</dd>
<dt>link</dt>
<dd>Link function name</dd>
<dt>link_param</dt>
<dd>A list of link parameters. Values can be:<ul>
<li>numeric: Use as fixed value</li>
<li>"estimate": Estimate the parameter with default prior</li>
</ul></dd>
<dt>prior_beta_sd</dt>
<dd>Prior SD for regression coefficients (default: 2.5)</dd>
<dt>prior_c_sd</dt>
<dd>Prior SD for cutpoints (default: 10)</dd>
<dt>link_prior</dt>
<dd>A list of custom prior specifications for link parameters</dd></dl>

Arguments

Prepare data for full Stan model with link parameter inference — prepare_stan_data_full

<dl>

<dt>formula</dt>
<dd>A formula specifying the model</dd>


<dt>data</dt>
<dd>A data frame containing the variables</dd>


<dt>link</dt>
<dd>Link function name</dd>


<dt>link_param</dt>
<dd>A list of link parameters. Values can be:<ul>
<li>numeric: Use as fixed value</li>
<li>"estimate": Estimate the parameter with default prior</li>
</ul></dd>


<dt>prior_beta_sd</dt>
<dd>Prior SD for regression coefficients (default: 2.5)</dd>


<dt>prior_c_sd</dt>
<dd>Prior SD for cutpoints (default: 10)</dd>


<dt>link_prior</dt>
<dd>A list of custom prior specifications for link parameters</dd>

</dl>

prepare_stan_data_full: Prepare data for full Stan model with link parameter inference

Description

Usage

Value

Arguments