convert.clone.to.branch

merged.tree data frame from clonevol

named vector of branch lengths, named according
to the cluster/clone ID/name. If not provided, all branches will receive
a same length

branch.lens:

Create a branch-based clonal evolution tree from tree data.frame

clonevol performs clonal ordering and visualization using
the variant clustering results. It uses a bootstrap resampling
technique to estimate the cellular prevalence of the clones within
samples and probabilistically model clonal ordering constraints
(sum and cross rules), hence it tolerates error and variability
in cellular prevalence estimates of individual variants.

convert.clone.to.branch: Create a tree from the merged.tree data.frame in clonevol output

Description

Usage

Arguments

Value