dk-class

Objects of class <code>'dk'</code> contain a data.frame which have three variables <code>k</code>, <code>a</code> and <code>deltak</code>
as described in the <code><a rd-options="" href="/link/deltak?package=clusterCons&version=1.2" data-mini-rdoc="clusterCons::deltak">deltak</a></code> function description. This class simply holds the result from a call to <code><a rd-options="" href="/link/deltak?package=clusterCons&version=1.2" data-mini-rdoc="clusterCons::deltak">deltak</a></code>.

classes

Functions for calculation of robustness measures for clusters and cluster membership based on generating consensus matrices from bootstrapped clustering experiments in which a random proportion of rows of the data set are used in each individual clustering. This allows the user to prioritise clusters and the members of clusters based on their consistency in this regime. The functions allow the user to select several algorithms to use in the re-sampling scheme and with any of the parameters that the algorithm would normally take. See Simpson, T. I., Armstrong, J. D. & Jarman, A. P. (2010) <doi:10.1186/1471-2105-11-590> and Monti, S., Tamayo, P., Mesirov, J. & Golub, T. (2003) <doi:10.1023/a:1023949509487>.

Dr. T. Ian Simpson 

clusterCons

Consensus Clustering using Multiple Algorithms and Parameters

dk-class function

Objects can be created by calls of the form <code>new("dk", ...)</code>, although they are normally generated internally by the <code><a rd-options="" href="/link/deltak?package=clusterCons&version=1.2" data-mini-rdoc="clusterCons::deltak">deltak</a></code> function.

Objects from the Class

Objects of class <code>'dk'</code> contain a data.frame which have three variables <code>k</code>, <code>a</code> and <code>deltak</code>
as described in the <code><a rd-options='' href='deltak'>deltak</a></code> function description. This class simply holds the result from a call to <code><a rd-options='' href='deltak'>deltak</a></code>.

Class "dk" — dk-class

Objects can be created by calls of the form <code>new("dk", ...)</code>, although they are normally generated internally by the <code><a rd-options='' href='deltak'>deltak</a></code> function.

dk-class: Class "dk"

Description

Arguments

Objects from the Class

References

See Also

Examples