clusterProfiler (version 3.0.4)

dotplot,compareClusterResult-method: dotplot

Description

dot plot method

Usage

"dotplot"(object, x = ~Cluster, colorBy = "p.adjust", showCategory = 5, by = "geneRatio", includeAll = TRUE, font.size = 12, title = "")

Arguments

object

compareClusterResult object

x

x variable

colorBy

one of pvalue or p.adjust

showCategory

category numbers

by

one of geneRatio, Percentage or count

includeAll

logical

font.size

font size

title

figure title