add_node_points

Add node points to a clustering tree plot with the specified aesthetics.

internal

Deciding what resolution to use can be a difficult question when
approaching a clustering analysis. One way to approach this problem is to
look at how samples move as the number of clusters increases. This package
allows you to produce clustering trees, a visualisation for interrogating
clusterings as resolution increases.

Luke Zappia

clustree

Visualise Clusterings at Different Resolutions

Alicia Oshlack

Andrea Rau

Paul Hoffman

add_node_points function

<dl><dt>node_colour</dt>
<dd>either a value indicating a colour to use for all nodes or
the name of a metadata column to colour nodes by</dd>
<dt>node_size</dt>
<dd>either a numeric value giving the size of all nodes or the
name of a metadata column to use for node sizes</dd>
<dt>node_alpha</dt>
<dd>either a numeric value giving the alpha of all nodes or the
name of a metadata column to use for node transparency</dd>
<dt>allowed</dt>
<dd>vector of allowed node attributes to use as aesthetics</dd></dl>

Arguments

Add node points — add_node_points

<dl>

<dt>node_colour</dt>
<dd>either a value indicating a colour to use for all nodes or
the name of a metadata column to colour nodes by</dd>


<dt>node_size</dt>
<dd>either a numeric value giving the size of all nodes or the
name of a metadata column to use for node sizes</dd>


<dt>node_alpha</dt>
<dd>either a numeric value giving the alpha of all nodes or the
name of a metadata column to use for node transparency</dd>


<dt>allowed</dt>
<dd>vector of allowed node attributes to use as aesthetics</dd>

</dl>

add_node_points: Add node points

Description

Usage

Arguments