create_msms_body

<code>create_msms_body</code> returns a string of a POST request body.

CEU (CEU San Pablo University) Mass Mediator is an on-line tool for aiding researchers in
performing metabolite annotation. 'cmmr' (CEU Mass Mediator RESTful API) allows
for programmatic access in R: batch search, batch advanced search, MS/MS (tandem mass spectrometry) search, etc.
For more information about the API Endpoint please go to <https://github.com/YaoxiangLi/cmmr>.

Yaoxiang Li

cmmr

CEU Mass Mediator RESTful API

Alberto Gil de la Fuente

Charles Hinzman

Amrita Cheema

create_msms_body function

<dl><dt>ion_mass</dt>
<dd>ion_mass</dd>
<dt>ms_ms_peaks</dt>
<dd>ms_ms_peaks</dd>
<dt>precursor_ion_tolerance</dt>
<dd>precursor_ion_tolerance</dd>
<dt>precursor_ion_tolerance_mode</dt>
<dd>precursor_ion_tolerance_mode</dd>
<dt>precursor_mz_tolerance</dt>
<dd>precursor_mz_tolerance</dd>
<dt>precursor_mz_tolerance_mode</dt>
<dd>precursor_mz_tolerance_mode</dd>
<dt>ion_mode</dt>
<dd>ion_mode</dd>
<dt>ionization_voltage</dt>
<dd>ionization_voltage</dd>
<dt>spectra_types</dt>
<dd>spectra_types</dd></dl>

Arguments

Create MS/MS search POST request body — create_msms_body

<dl>

<dt>ion_mass</dt>
<dd>ion_mass</dd>


<dt>ms_ms_peaks</dt>
<dd>ms_ms_peaks</dd>


<dt>precursor_ion_tolerance</dt>
<dd>precursor_ion_tolerance</dd>


<dt>precursor_ion_tolerance_mode</dt>
<dd>precursor_ion_tolerance_mode</dd>


<dt>precursor_mz_tolerance</dt>
<dd>precursor_mz_tolerance</dd>


<dt>precursor_mz_tolerance_mode</dt>
<dd>precursor_mz_tolerance_mode</dd>


<dt>ion_mode</dt>
<dd>ion_mode</dd>


<dt>ionization_voltage</dt>
<dd>ionization_voltage</dd>


<dt>spectra_types</dt>
<dd>spectra_types</dd>

</dl>

create_msms_body: Create MS/MS search POST request body

Description

Usage

Value

Arguments