normalizeNone

filenames

cores

annotDir

alleles

states the number of cycles for the EM algorithm.

Mode how the results are saved. Possible values are ff or bm.
If ff is chosen the data will not be saved automatically.
With bm the results will be saved permanently.

runtype

pkgname

saveFile


Runs the SOR normalization on microarray data


This package implements the cn.FARMS algorithm for copy
number variation (CNV) analysis. cn.FARMS allows to analyze the
most common Affymetrix (250K-SNP6.0) array types, supports
high-performance computing using snow and ff.

Andreas Mitterecker

cn.farms

cn.FARMS - factor analysis for copy number estimation

normalizeNone function

Runs the SOR normalization on microarray data

normalizeNone: Runs the SOR normalization on microarray data

Description

Usage

Arguments

Value