cn.farms (version 1.20.0)

plotSmoothScatter: Creates a smooth scatter plot

Description

Creates a smooth scatter plot

Usage

plotSmoothScatter(object, variable, chrom, start, end, ylim, pdfname, ...)

Arguments

object

An instance of ExpressionSet.

variable

States which variable of the assayData should be plotted.

chrom

The chromosome you want to plot.

start

The physical start position.

end

The physical end position.

ylim

The limits for the y axis.

pdfname

The name of the pdf file.

...

Further arguments passed to smoothScatter function.

Value

A graph.

Examples

load(system.file("exampleData/slData.RData", package = "cn.farms"))
plotSmoothScatter(slData[, 1:3], chrom = "23")