clinCNV

chromhmmNoPattern

chromhmmPattern

chromhmmtrackone

clinVariant

coreilVariant

cosmicVariant

cpgIstrack

dnasetrack

gadtrack

gwastrack

geneRtrack

geneNameEnsembl

genesUcsctrack

gctrack

genetrack

histonalltrack

histoneonetrack

iscatrack

regulationENSEMBLtrack

rmtrack

snptrack

snpUCSCtrack

strutrack

transENSMBLtrack

xenogenestrack


Some sample data sets used for the illustrative examples and the vignette.


 datasets

 internal

Visualisation of EWAS results in a genomic region. In addition to phenotype-association P-values, coMET also generates plots of co-methylation patterns and provides a series of annotation tracks. It can be used to other omic-wide association scans as long as the data can be translated to genomic level and for any species.

Tiphaine Martin

coMET

coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns.

clinCNV function


Data sets


clinCNV: Data sets

Description

Arguments