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coala (version 0.1.0)

A Framework for Coalescent Simulation

Description

Coalescent simulators can rapidly simulate biological sequences evolving according to a given model of evolution. This package allows to specify such models, transparently calls a suitable simulator, parses the results and calculates additional summary statistics. It supports the simulators 'ms', 'msms' and 'scrm' and can simulate finite-sites mutation models by combining the simulators with the program 'seq-gen'.

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install.packages('coala')

Monthly Downloads

376

Version

0.1.0

License

MIT + file LICENSE

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Last Published

July 14th, 2015

Functions in coala (0.1.0)