sumstat_sfs

The name of the summary statistic. When simulating a model,
the value of the statistics are written to an entry of the returned list
with this name. Summary statistic names must be unique in a model.

name

Either the number of a population for with the SFS is
calculated, or <code>"all"</code> to calculate the combined SFS of all
populations.

population

An optional function for transforming the results
of the statistic. If specified, the results of the transformation are
returned instead of the original values.

transformation

Calculates the Site Frequency Spectrum from simulations

Coalescent simulators can rapidly simulate biological sequences
    evolving according to a given model of evolution.
    This package allows to specify such models, transparently calls a suitable
    simulator, parses the results and calculates additional summary statistics.
    It supports the simulators 'ms', 'msms' and 'scrm' and can simulate
    finite-sites mutation models by combining the simulators with the program
    'seq-gen'.

sumstat_sfs: Calculates the Site Frequency Spectrum from simulations

Description

Usage

Arguments