calc_jsfs

segsites_list

A list of integer vector, where each entry gives the
index of the haploids that belong the corresponding population.

ind_per_pop


Calculates the Joint Site Frequency Spectrum


internal

Coalescent simulators can rapidly simulate biological sequences
evolving according to a given model of evolution.
You can use this package to specify such models, to conduct the simulations
and to calculate additional statistics from the results.
It relies on existing simulators for doing the simulation, and currently
supports the programs 'ms', 'msms' and 'scrm'. It also supports finite-sites
mutation models by combining the simulators with the program 'seq-gen'.

calc_jsfs: Calculates the Joint Site Frequency Spectrum

Description

Usage

Arguments

Value