coala

coala-package


This package allows to specify and simulate coalescent models from
within R. The `introduction` vignette is a good place to start.


Coalescent simulators can rapidly simulate biological sequences
evolving according to a given model of evolution.
You can use this package to specify such models, to conduct the simulations
and to calculate additional statistics from the results.
It relies on existing simulators for doing the simulation, and currently
supports the programs 'ms', 'msms' and 'scrm'. It also supports finite-sites
mutation models by combining the simulators with the program 'seq-gen'.

coala-package: A Framework for Coalescent Simulation in R

Description

Arguments