coalescentMCMC v0.4-1
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MCMC Algorithms for the Coalescent
Flexible framework for coalescent analyses in R. It includes a main function running the MCMC algorithm, auxiliary functions for tree rearrangement, and some functions to compute population genetic parameters.
Functions in coalescentMCMC
| Name | Description | |
| dcoal | Density Functions of Various Time-Dependent Coalescent Models | |
| sim.coalescent | Coalescent Simulation and Visualisation | |
| treeOperators | Trees Operators for Running MCMC | |
| coalescentMCMC | Run MCMC for Coalescent Trees | |
| coalescentMCMC-internal | Internal coalescentMCMC Functions | |
| No Results! | ||
Vignettes of coalescentMCMC
| Name | ||
| CoalescentModels.Rnw | ||
| Running_coalescentMCMC.Rnw | ||
| coalescentMCMC.bib | ||
| No Results! | ||
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[](http://www.rdocumentation.org/packages/coalescentMCMC)