cobindR (version 1.10.0)

pairs: motif hit pairs in the foreground sequences

Description

motif hit pairs in the foreground sequences

Usage

"pairs"(x)
"pairs"(x) <- value
"pairs"(x)
"pairs"(x) <- value

Arguments

x

a cobindR configuration object

value

for a configuration object, pairs is a character specifying the motif pairs which should be considered. for a cobindR object, pairs is a data.frame holding the detected motif pairs.

Value

pairs (character)

See Also

id,experiment_description,sequence_source,sequence_origin,sequence_type,bg_sequence_source,bg_sequence_origin,bg_sequence_type,species,downstream,upstream,max_distance,pairs,pfm_path,threshold,fdrThreshold,path,mart,pValue

Examples

cfg <- cobindRConfiguration()
pairs(cfg)