write.bindingsites

write.bindingsites-method


    an object of the class "cobindr", which holds all necessary
    information about the sequences and the predicted binding sites.



    path to file. If filename is 'NULL' a filename is generated based on
    the name of the object of class "cobindr".    
  


    logical flag. If background is 'TRUE' the binding sites found in the
    background sequences are used.
  


	writes predicted binding sites as a BED file.


Finding and analysing co-occuring motifs of transcription
factor binding sites in groups of genes

an object of the class "cobindr", which holds all necessary
    information about the sequences and the predicted binding sites.

path to file. If filename is 'NULL' a filename is generated based on
    the name of the object of class "cobindr".

logical flag. If background is 'TRUE' the binding sites found in the
    background sequences are used.

writes predicted binding sites as a BED file.