shannon_sim

Shannon similarity between two compositions

Functions for microbiome data analysis that take into account its compositional nature. Performs variable selection through penalized regression for both, cross-sectional and longitudinal studies, and for binary and continuous outcomes.

Toni Susin

coda4microbiome

Compositional Data Analysis for Microbiome Studies

Malu Calle

Meritxell Pujolassos

shannon_sim function

<dl><dt>x</dt>
<dd>abundance composition (vector)</dd>
<dt>y</dt>
<dd>abundance composition (vector)</dd></dl>

Arguments

Author

shannon_sim — shannon_sim

<dl>

<dt>x</dt>
<dd>abundance composition (vector)</dd>


<dt>y</dt>
<dd>abundance composition (vector)</dd>

</dl>

shannon_sim: shannon_sim

Description

Usage

Value

Arguments

Author

Examples