pClusters

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cogena is a workflow for co-expressed gene-set enrichment analysis.
It aims to discovery smaller scale, but highly correlated cellular events that
may be of great biological relevance. A novel pipeline for drug discovery and
drug repositioning based on the cogena workflow is proposed. Particularly,
candidate drugs can be predicted based on the gene expression of disease-related
data, or other similar drugs can be identified based on the gene expression
of drug-related data. Moreover, the drug mode of action can be disclosed by
the associated pathway analysis. In summary, cogena is a flexible workflow for
various gene set enrichment analysis for co-expressed genes, with a focus on
pathway/GO analysis and drug repositioning.

pClusters: paralleled clustering

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