compEpiTools (version 1.6.3)

TSS: based on a TxDb returns a GRanges with the TSS positions for all transcripts

Description

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

Usage

TSS(txdb)

Arguments

txdb

An object of class TxDb

Value

Details

based on a TxDb returns a GRanges of width 1 with the TSS positions for all transcripts

References

http://genomics.iit.it/groups/computational-epigenomics.html

Examples

require(TxDb.Mmusculus.UCSC.mm9.knownGene)
txdb <- TxDb.Mmusculus.UCSC.mm9.knownGene
res <- TSS(txdb)
res[1:2]