compcodeR (version 1.8.2)

checkDataObject: Check a list or a compData object for compatibility with the differential expression functions interfaced by compcodeR

Description

Check if a list or a compData object contains the necessary slots for applying the differential expression functions interfaced by the compcodeR package. This function is provided for backward compatibility, see also check_compData and check_compData_results.

Usage

checkDataObject(data.obj)

Arguments

data.obj

A list containing data and condition information, or a compData object.

Examples

mydata.obj <- generateSyntheticData(dataset = "mydata", n.vars = 1000,
                                    samples.per.cond = 5, n.diffexp = 100)
checkDataObject(mydata.obj)