compendiumdb (version 1.0.3)

removeGSE: Remove a GSE from the compendium database

Description

Remove a GEO series (GSE) record and other entries corresponding to it from the compendium database

Usage

removeGSE(con, GSEid)

Arguments

con

list containing a connection object specifying the user name and password to connect or interact with the compendium database (see connectDatabase)

GSEid

character string specifying the GSE ID to be removed

Details

A side effect of this function is that the corresponding GPL is also removed from the compendium database if the removed GSE was the only one with this GPL ID.

Examples

 ## Not run: 
#   conn <- connectDatabase(user="usrname",password="passwd",dbname="compendium")
#   removeGSE(conn,"GSE23183")
#  ## End(Not run)